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Cluster: HRGMv2_0994_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0994_17 HRGMv2_0994_17_10 13605 15287 + 2.A.66.4.4
pfam HRGMv2_0994_17 HRGMv2_0994_17_11 15294 17234 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0994_17 HRGMv2_0994_17_12 17599 19212 + 3.A.1.5.27
TC HRGMv2_0994_17 HRGMv2_0994_17_13 19370 20326 + 3.A.1.5.38
TC HRGMv2_0994_17 HRGMv2_0994_17_14 20330 22345 + 3.A.1.5.25
TC HRGMv2_0994_17 HRGMv2_0994_17_15 22346 23173 + 3.A.1.5.27
CAZyme HRGMv2_0994_17 HRGMv2_0994_17_16 23305 24231 + CE7
Gene ID: HRGMv2_0994_17_10
Type: TC
Location: 13605 - 15287 (+)
Gene ID: HRGMv2_0994_17_11
Type: pfam
Location: 15294 - 17234 (+)
Gene ID: HRGMv2_0994_17_12
Type: TC
Location: 17599 - 19212 (+)
Gene ID: HRGMv2_0994_17_13
Type: TC
Location: 19370 - 20326 (+)
Gene ID: HRGMv2_0994_17_14
Type: TC
Location: 20330 - 22345 (+)
Gene ID: HRGMv2_0994_17_15
Type: TC
Location: 22346 - 23173 (+)
Gene ID: HRGMv2_0994_17_16
Type: CAZyme
Location: 23305 - 24231 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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