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Cluster: HRGMv2_0994_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0994_15 HRGMv2_0994_15_22 26995 27702 + 1.C.82.1.1
pfam HRGMv2_0994_15 HRGMv2_0994_15_23 27828 28538 - Metallophos | Metallophos_2
pfam HRGMv2_0994_15 HRGMv2_0994_15_24 28535 30451 - Bmp
TC HRGMv2_0994_15 HRGMv2_0994_15_25 30543 31310 - 1.A.23.4.10
pfam HRGMv2_0994_15 HRGMv2_0994_15_26 31440 33464 - Metallophos | 5_nucleotid_C
TC HRGMv2_0994_15 HRGMv2_0994_15_27 33623 34417 - 3.A.1.34.1
TC HRGMv2_0994_15 HRGMv2_0994_15_28 34410 35333 - 3.A.1.34.1
TC HRGMv2_0994_15 HRGMv2_0994_15_29 35537 36517 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0994_15 HRGMv2_0994_15_30 36678 37463 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0994_15 HRGMv2_0994_15_31 37723 39126 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0994_15 HRGMv2_0994_15_32 39308 39871 - 4.A.1.2.6
peptidase HRGMv2_0994_15 HRGMv2_0994_15_33 40116 41015 + S09.UPW
TC HRGMv2_0994_15 HRGMv2_0994_15_34 41489 43849 + 9.A.8.1.6
TC HRGMv2_0994_15 HRGMv2_0994_15_35 43970 45166 + 2.A.1.2.18
CAZyme HRGMv2_0994_15 HRGMv2_0994_15_36 45320 46696 + GH13_20
Gene ID: HRGMv2_0994_15_22
Type: TC
Location: 26995 - 27702 (+)
Gene ID: HRGMv2_0994_15_23
Type: pfam
Location: 27828 - 28538 (-)
Gene ID: HRGMv2_0994_15_24
Type: pfam
Location: 28535 - 30451 (-)
Gene ID: HRGMv2_0994_15_25
Type: TC
Location: 30543 - 31310 (-)
Gene ID: HRGMv2_0994_15_26
Type: pfam
Location: 31440 - 33464 (-)
Gene ID: HRGMv2_0994_15_27
Type: TC
Location: 33623 - 34417 (-)
Gene ID: HRGMv2_0994_15_28
Type: TC
Location: 34410 - 35333 (-)
Gene ID: HRGMv2_0994_15_29
Type: TC
Location: 35537 - 36517 (-)
Gene ID: HRGMv2_0994_15_30
Type:
Location: 36678 - 37463 (-)
Gene ID: HRGMv2_0994_15_31
Type: pfam
Location: 37723 - 39126 (-)
Gene ID: HRGMv2_0994_15_32
Type: TC
Location: 39308 - 39871 (-)
Gene ID: HRGMv2_0994_15_33
Type: peptidase
Location: 40116 - 41015 (+)
Gene ID: HRGMv2_0994_15_34
Type: TC
Location: 41489 - 43849 (+)
Gene ID: HRGMv2_0994_15_35
Type: TC
Location: 43970 - 45166 (+)
Gene ID: HRGMv2_0994_15_36
Type: CAZyme
Location: 45320 - 46696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0994_15_26 vegan > omnivore 1.82745 0.00455
HRGMv2_0994_15_26 vegetarian > omnivore 1.35770 0.01560

🧭 Explore Read Mapping of CGC

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