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Cluster: HRGMv2_0994_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0994_49 HRGMv2_0994_49_2 1434 3194 - 4.A.3.1.1
CAZyme HRGMv2_0994_49 HRGMv2_0994_49_3 3371 4813 - GH1
TF HRGMv2_0994_49 HRGMv2_0994_49_4 5154 6191 + LacI
CAZyme HRGMv2_0994_49 HRGMv2_0994_49_5 6468 7907 - GH1
TC HRGMv2_0994_49 HRGMv2_0994_49_6 7974 9740 - 4.A.3.1.1
TF HRGMv2_0994_49 HRGMv2_0994_49_7 10098 11102 + LacI
TC HRGMv2_0994_49 HRGMv2_0994_49_8 11316 11654 + 4.A.3.1.2
Gene ID: HRGMv2_0994_49_2
Type: TC
Location: 1434 - 3194 (-)
Gene ID: HRGMv2_0994_49_3
Type: CAZyme
Location: 3371 - 4813 (-)
Gene ID: HRGMv2_0994_49_4
Type: TF
Location: 5154 - 6191 (+)
Gene ID: HRGMv2_0994_49_5
Type: CAZyme
Location: 6468 - 7907 (-)
Gene ID: HRGMv2_0994_49_6
Type: TC
Location: 7974 - 9740 (-)
Gene ID: HRGMv2_0994_49_7
Type: TF
Location: 10098 - 11102 (+)
Gene ID: HRGMv2_0994_49_8
Type: TC
Location: 11316 - 11654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0994_49_4 vegetarian > omnivore 1.01591 0.01560

🧭 Explore Read Mapping of CGC

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