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Cluster: HRGMv2_0994_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0994_25 HRGMv2_0994_25_11 14920 17370 - 4.A.1.1.8
TF HRGMv2_0994_25 HRGMv2_0994_25_12 17600 18319 + GntR
TC HRGMv2_0994_25 HRGMv2_0994_25_13 18626 19942 + 3.A.1.1.45
TC HRGMv2_0994_25 HRGMv2_0994_25_14 20030 20884 + 3.A.1.1.45
TC HRGMv2_0994_25 HRGMv2_0994_25_15 20884 21723 + 3.A.1.1.45
TC HRGMv2_0994_25 HRGMv2_0994_25_16 21792 22991 + 3.A.1.1.22
CAZyme HRGMv2_0994_25 HRGMv2_0994_25_17 23369 25636 - GT35
CAZyme HRGMv2_0994_25 HRGMv2_0994_25_18 25765 27270 - GH77
Gene ID: HRGMv2_0994_25_11
Type: TC
Location: 14920 - 17370 (-)
Gene ID: HRGMv2_0994_25_12
Type: TF
Location: 17600 - 18319 (+)
Gene ID: HRGMv2_0994_25_13
Type: TC
Location: 18626 - 19942 (+)
Gene ID: HRGMv2_0994_25_14
Type: TC
Location: 20030 - 20884 (+)
Gene ID: HRGMv2_0994_25_15
Type: TC
Location: 20884 - 21723 (+)
Gene ID: HRGMv2_0994_25_16
Type: TC
Location: 21792 - 22991 (+)
Gene ID: HRGMv2_0994_25_17
Type: CAZyme
Location: 23369 - 25636 (-)
Gene ID: HRGMv2_0994_25_18
Type: CAZyme
Location: 25765 - 27270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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