Cluster: HRGMv2_0994_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0994
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0994_1 | HRGMv2_0994_1_123 | 127042 | 127809 | - | 3.A.1.103.1 |
| TC | HRGMv2_0994_1 | HRGMv2_0994_1_124 | 127821 | 128666 | - | 3.A.1.103.6 |
| CAZyme | HRGMv2_0994_1 | HRGMv2_0994_1_125 | 128827 | 129798 | + | GT81 |
Gene ID: HRGMv2_0994_1_123
Type: TC
Location: 127042 - 127809 (-)
Type: TC
Location: 127042 - 127809 (-)
Gene ID: HRGMv2_0994_1_124
Type: TC
Location: 127821 - 128666 (-)
Type: TC
Location: 127821 - 128666 (-)
Gene ID: HRGMv2_0994_1_125
Type: CAZyme
Location: 128827 - 129798 (+)
Type: CAZyme
Location: 128827 - 129798 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.