Cluster: HRGMv2_0993_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0993_39 | HRGMv2_0993_39_6 | 4701 | 6143 | - | GH32 |
| TC | HRGMv2_0993_39 | HRGMv2_0993_39_7 | 6245 | 7696 | - | 4.A.1.2.8 |
| CAZyme | HRGMv2_0993_39 | HRGMv2_0993_39_8 | 7742 | 9124 | - | GH32 |
Gene ID: HRGMv2_0993_39_6
Type: CAZyme
Location: 4701 - 6143 (-)
Type: CAZyme
Location: 4701 - 6143 (-)
Gene ID: HRGMv2_0993_39_7
Type: TC
Location: 6245 - 7696 (-)
Type: TC
Location: 6245 - 7696 (-)
Gene ID: HRGMv2_0993_39_8
Type: CAZyme
Location: 7742 - 9124 (-)
Type: CAZyme
Location: 7742 - 9124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.