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Cluster: HRGMv2_0993_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0993_14 HRGMv2_0993_14_5 7645 10062 - 4.A.1.1.8
TF HRGMv2_0993_14 HRGMv2_0993_14_6 10325 11044 + GntR
TC HRGMv2_0993_14 HRGMv2_0993_14_7 11350 12666 + 3.A.1.1.45
TC HRGMv2_0993_14 HRGMv2_0993_14_8 12754 13608 + 3.A.1.1.45
TC HRGMv2_0993_14 HRGMv2_0993_14_9 13608 14447 + 3.A.1.1.45
TC HRGMv2_0993_14 HRGMv2_0993_14_10 14516 15715 + 3.A.1.1.22
CAZyme HRGMv2_0993_14 HRGMv2_0993_14_11 16173 18440 - GT35
CAZyme HRGMv2_0993_14 HRGMv2_0993_14_12 18569 20074 - GH77
Gene ID: HRGMv2_0993_14_5
Type: TC
Location: 7645 - 10062 (-)
Gene ID: HRGMv2_0993_14_6
Type: TF
Location: 10325 - 11044 (+)
Gene ID: HRGMv2_0993_14_7
Type: TC
Location: 11350 - 12666 (+)
Gene ID: HRGMv2_0993_14_8
Type: TC
Location: 12754 - 13608 (+)
Gene ID: HRGMv2_0993_14_9
Type: TC
Location: 13608 - 14447 (+)
Gene ID: HRGMv2_0993_14_10
Type: TC
Location: 14516 - 15715 (+)
Gene ID: HRGMv2_0993_14_11
Type: CAZyme
Location: 16173 - 18440 (-)
Gene ID: HRGMv2_0993_14_12
Type: CAZyme
Location: 18569 - 20074 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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