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Cluster: HRGMv2_0993_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0993_5 HRGMv2_0993_5_15 17036 19378 - 3.A.3.5.15
STP HRGMv2_0993_5 HRGMv2_0993_5_16 19629 21713 - Pkinase
STP HRGMv2_0993_5 HRGMv2_0993_5_17 21885 22847 - FHA
TC HRGMv2_0993_5 HRGMv2_0993_5_18 23355 25598 + 1.I.1.1.3
STP HRGMv2_0993_5 HRGMv2_0993_5_19 26219 26980 + Fer4
TC HRGMv2_0993_5 HRGMv2_0993_5_20 27403 27915 + 4.A.1.2.5
pfam HRGMv2_0993_5 HRGMv2_0993_5_21 27969 28787 + PRD | PRD | CAT_RBD
TC HRGMv2_0993_5 HRGMv2_0993_5_22 28887 30503 + 4.A.1.1.3
CAZyme HRGMv2_0993_5 HRGMv2_0993_5_23 30507 31379 + GH4
Gene ID: HRGMv2_0993_5_15
Type: TC
Location: 17036 - 19378 (-)
Gene ID: HRGMv2_0993_5_16
Type: STP
Location: 19629 - 21713 (-)
Gene ID: HRGMv2_0993_5_17
Type: STP
Location: 21885 - 22847 (-)
Gene ID: HRGMv2_0993_5_18
Type: TC
Location: 23355 - 25598 (+)
Gene ID: HRGMv2_0993_5_19
Type: STP
Location: 26219 - 26980 (+)
Gene ID: HRGMv2_0993_5_20
Type: TC
Location: 27403 - 27915 (+)
Gene ID: HRGMv2_0993_5_21
Type: pfam
Location: 27969 - 28787 (+)
Gene ID: HRGMv2_0993_5_22
Type: TC
Location: 28887 - 30503 (+)
Gene ID: HRGMv2_0993_5_23
Type: CAZyme
Location: 30507 - 31379 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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