Cluster: HRGMv2_0993_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0993_81 | HRGMv2_0993_81_3 | 1412 | 2338 | - | CE7 |
| TC | HRGMv2_0993_81 | HRGMv2_0993_81_4 | 2470 | 3297 | - | 3.A.1.5.27 |
| TC | HRGMv2_0993_81 | HRGMv2_0993_81_5 | 3298 | 5313 | - | 3.A.1.5.25 |
| TC | HRGMv2_0993_81 | HRGMv2_0993_81_6 | 5317 | 6273 | - | 3.A.1.5.38 |
| TC | HRGMv2_0993_81 | HRGMv2_0993_81_7 | 6431 | 8044 | - | 3.A.1.5.27 |
Gene ID: HRGMv2_0993_81_3
Type: CAZyme
Location: 1412 - 2338 (-)
Type: CAZyme
Location: 1412 - 2338 (-)
Gene ID: HRGMv2_0993_81_4
Type: TC
Location: 2470 - 3297 (-)
Type: TC
Location: 2470 - 3297 (-)
Gene ID: HRGMv2_0993_81_5
Type: TC
Location: 3298 - 5313 (-)
Type: TC
Location: 3298 - 5313 (-)
Gene ID: HRGMv2_0993_81_6
Type: TC
Location: 5317 - 6273 (-)
Type: TC
Location: 5317 - 6273 (-)
Gene ID: HRGMv2_0993_81_7
Type: TC
Location: 6431 - 8044 (-)
Type: TC
Location: 6431 - 8044 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.