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Cluster: HRGMv2_0992_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0992_1 HRGMv2_0992_1_209 245530 246906 - GH13_20
TC HRGMv2_0992_1 HRGMv2_0992_1_210 247089 248285 - 2.A.1.2.18
TC HRGMv2_0992_1 HRGMv2_0992_1_211 248409 250769 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0992_1 HRGMv2_0992_1_212 250891 251211 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0992_1 HRGMv2_0992_1_213 251259 252158 - S09.UPW
TC HRGMv2_0992_1 HRGMv2_0992_1_214 252403 252966 + 4.A.1.2.6
pfam HRGMv2_0992_1 HRGMv2_0992_1_215 253148 254551 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0992_1 HRGMv2_0992_1_216 254810 255595 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0992_1 HRGMv2_0992_1_217 255756 256736 + 3.A.1.34.1
TC HRGMv2_0992_1 HRGMv2_0992_1_218 256940 257863 + 3.A.1.34.1
TC HRGMv2_0992_1 HRGMv2_0992_1_219 257856 258650 + 3.A.1.34.1
Gene ID: HRGMv2_0992_1_209
Type: CAZyme
Location: 245530 - 246906 (-)
Gene ID: HRGMv2_0992_1_210
Type: TC
Location: 247089 - 248285 (-)
Gene ID: HRGMv2_0992_1_211
Type: TC
Location: 248409 - 250769 (-)
Gene ID: HRGMv2_0992_1_212
Type:
Location: 250891 - 251211 (-)
Gene ID: HRGMv2_0992_1_213
Type: peptidase
Location: 251259 - 252158 (-)
Gene ID: HRGMv2_0992_1_214
Type: TC
Location: 252403 - 252966 (+)
Gene ID: HRGMv2_0992_1_215
Type: pfam
Location: 253148 - 254551 (+)
Gene ID: HRGMv2_0992_1_216
Type:
Location: 254810 - 255595 (+)
Gene ID: HRGMv2_0992_1_217
Type: TC
Location: 255756 - 256736 (+)
Gene ID: HRGMv2_0992_1_218
Type: TC
Location: 256940 - 257863 (+)
Gene ID: HRGMv2_0992_1_219
Type: TC
Location: 257856 - 258650 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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