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Cluster: HRGMv2_0992_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0992_27 HRGMv2_0992_27_17 16629 17555 - CE7
TC HRGMv2_0992_27 HRGMv2_0992_27_18 17687 18514 - 3.A.1.5.27
TC HRGMv2_0992_27 HRGMv2_0992_27_19 18515 20530 - 3.A.1.5.25
TC HRGMv2_0992_27 HRGMv2_0992_27_20 20534 21490 - 3.A.1.5.38
TC HRGMv2_0992_27 HRGMv2_0992_27_21 21648 23261 - 3.A.1.5.27
pfam HRGMv2_0992_27 HRGMv2_0992_27_22 23627 25567 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0992_27 HRGMv2_0992_27_23 25574 27256 - 2.A.66.4.4
Gene ID: HRGMv2_0992_27_17
Type: CAZyme
Location: 16629 - 17555 (-)
Gene ID: HRGMv2_0992_27_18
Type: TC
Location: 17687 - 18514 (-)
Gene ID: HRGMv2_0992_27_19
Type: TC
Location: 18515 - 20530 (-)
Gene ID: HRGMv2_0992_27_20
Type: TC
Location: 20534 - 21490 (-)
Gene ID: HRGMv2_0992_27_21
Type: TC
Location: 21648 - 23261 (-)
Gene ID: HRGMv2_0992_27_22
Type: pfam
Location: 23627 - 25567 (-)
Gene ID: HRGMv2_0992_27_23
Type: TC
Location: 25574 - 27256 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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