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Cluster: HRGMv2_0992_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0992_24 HRGMv2_0992_24_3 2424 3824 + GH1
TC HRGMv2_0992_24 HRGMv2_0992_24_4 4115 5311 + 4.A.3.2.2
TC HRGMv2_0992_24 HRGMv2_0992_24_5 5465 5767 + 4.A.3.2.8
TC HRGMv2_0992_24 HRGMv2_0992_24_6 5777 6109 + 4.A.3.2.3
pfam HRGMv2_0992_24 HRGMv2_0992_24_7 6245 6916 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_0992_24 HRGMv2_0992_24_8 6926 7234 + 4.A.3.2.3
STP HRGMv2_0992_24 HRGMv2_0992_24_9 7420 8373 + Glucokinase
pfam HRGMv2_0992_24 HRGMv2_0992_24_10 8539 9462 + DHH | DHHA2
TC HRGMv2_0992_24 HRGMv2_0992_24_11 9731 11089 + 2.A.33.1.1
Gene ID: HRGMv2_0992_24_3
Type: CAZyme
Location: 2424 - 3824 (+)
Gene ID: HRGMv2_0992_24_4
Type: TC
Location: 4115 - 5311 (+)
Gene ID: HRGMv2_0992_24_5
Type: TC
Location: 5465 - 5767 (+)
Gene ID: HRGMv2_0992_24_6
Type: TC
Location: 5777 - 6109 (+)
Gene ID: HRGMv2_0992_24_7
Type: pfam
Location: 6245 - 6916 (+)
Gene ID: HRGMv2_0992_24_8
Type: TC
Location: 6926 - 7234 (+)
Gene ID: HRGMv2_0992_24_9
Type: STP
Location: 7420 - 8373 (+)
Gene ID: HRGMv2_0992_24_10
Type: pfam
Location: 8539 - 9462 (+)
Gene ID: HRGMv2_0992_24_11
Type: TC
Location: 9731 - 11089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0992_24_5 vegan > omnivore 1.00635 0.00701

🧭 Explore Read Mapping of CGC

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