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Cluster: HRGMv2_0992_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0992_17 HRGMv2_0992_17_11 14633 17077 - 4.A.1.1.8
TF HRGMv2_0992_17 HRGMv2_0992_17_12 17306 18025 + GntR
TC HRGMv2_0992_17 HRGMv2_0992_17_13 18330 19646 + 3.A.1.1.45
TC HRGMv2_0992_17 HRGMv2_0992_17_14 19734 20588 + 3.A.1.1.45
TC HRGMv2_0992_17 HRGMv2_0992_17_15 20588 21427 + 3.A.1.1.45
TC HRGMv2_0992_17 HRGMv2_0992_17_16 21496 22695 + 3.A.1.1.22
CAZyme HRGMv2_0992_17 HRGMv2_0992_17_17 23072 25339 - GT35
CAZyme HRGMv2_0992_17 HRGMv2_0992_17_18 25469 26974 - GH77
Gene ID: HRGMv2_0992_17_11
Type: TC
Location: 14633 - 17077 (-)
Gene ID: HRGMv2_0992_17_12
Type: TF
Location: 17306 - 18025 (+)
Gene ID: HRGMv2_0992_17_13
Type: TC
Location: 18330 - 19646 (+)
Gene ID: HRGMv2_0992_17_14
Type: TC
Location: 19734 - 20588 (+)
Gene ID: HRGMv2_0992_17_15
Type: TC
Location: 20588 - 21427 (+)
Gene ID: HRGMv2_0992_17_16
Type: TC
Location: 21496 - 22695 (+)
Gene ID: HRGMv2_0992_17_17
Type: CAZyme
Location: 23072 - 25339 (-)
Gene ID: HRGMv2_0992_17_18
Type: CAZyme
Location: 25469 - 26974 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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