dbCAN Logo

Cluster: HRGMv2_0991_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0991_10 HRGMv2_0991_10_45 45061 46461 + GH1
TC HRGMv2_0991_10 HRGMv2_0991_10_46 46582 47925 + 4.A.3.2.9
TC HRGMv2_0991_10 HRGMv2_0991_10_47 48088 48390 + 4.A.3.2.9
TC HRGMv2_0991_10 HRGMv2_0991_10_48 48400 48732 + 4.A.3.2.3
pfam HRGMv2_0991_10 HRGMv2_0991_10_49 48974 49927 + ROK
pfam HRGMv2_0991_10 HRGMv2_0991_10_50 50094 51017 + DHH | DHHA2
TC HRGMv2_0991_10 HRGMv2_0991_10_51 51282 52640 + 2.A.33.1.1
Gene ID: HRGMv2_0991_10_45
Type: CAZyme
Location: 45061 - 46461 (+)
Gene ID: HRGMv2_0991_10_46
Type: TC
Location: 46582 - 47925 (+)
Gene ID: HRGMv2_0991_10_47
Type: TC
Location: 48088 - 48390 (+)
Gene ID: HRGMv2_0991_10_48
Type: TC
Location: 48400 - 48732 (+)
Gene ID: HRGMv2_0991_10_49
Type: pfam
Location: 48974 - 49927 (+)
Gene ID: HRGMv2_0991_10_50
Type: pfam
Location: 50094 - 51017 (+)
Gene ID: HRGMv2_0991_10_51
Type: TC
Location: 51282 - 52640 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List