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Cluster: HRGMv2_0991_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0991_40 HRGMv2_0991_40_4 3575 5080 + GH77
CAZyme HRGMv2_0991_40 HRGMv2_0991_40_5 5209 7476 + GT35
TC HRGMv2_0991_40 HRGMv2_0991_40_6 7934 9133 - 3.A.1.1.22
TC HRGMv2_0991_40 HRGMv2_0991_40_7 9202 10041 - 3.A.1.1.45
TC HRGMv2_0991_40 HRGMv2_0991_40_8 10041 10895 - 3.A.1.1.45
TC HRGMv2_0991_40 HRGMv2_0991_40_9 10983 12299 - 3.A.1.1.45
TF HRGMv2_0991_40 HRGMv2_0991_40_10 12606 13325 - GntR
TC HRGMv2_0991_40 HRGMv2_0991_40_11 13555 16005 + 4.A.1.1.8
Gene ID: HRGMv2_0991_40_4
Type: CAZyme
Location: 3575 - 5080 (+)
Gene ID: HRGMv2_0991_40_5
Type: CAZyme
Location: 5209 - 7476 (+)
Gene ID: HRGMv2_0991_40_6
Type: TC
Location: 7934 - 9133 (-)
Gene ID: HRGMv2_0991_40_7
Type: TC
Location: 9202 - 10041 (-)
Gene ID: HRGMv2_0991_40_8
Type: TC
Location: 10041 - 10895 (-)
Gene ID: HRGMv2_0991_40_9
Type: TC
Location: 10983 - 12299 (-)
Gene ID: HRGMv2_0991_40_10
Type: TF
Location: 12606 - 13325 (-)
Gene ID: HRGMv2_0991_40_11
Type: TC
Location: 13555 - 16005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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