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Cluster: HRGMv2_0991_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0991_39 HRGMv2_0991_39_4 3411 4211 + 9.B.18.1.2
CAZyme HRGMv2_0991_39 HRGMv2_0991_39_5 4215 5132 + GT2
pfam HRGMv2_0991_39 HRGMv2_0991_39_6 5176 6447 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0991_39 HRGMv2_0991_39_7 6453 7745 + GT4
pfam HRGMv2_0991_39 HRGMv2_0991_39_8 7745 8692 + C5-epim_C
CAZyme HRGMv2_0991_39 HRGMv2_0991_39_9 8689 9792 + GT4
pfam HRGMv2_0991_39 HRGMv2_0991_39_10 9789 10877 + EpsG
pfam HRGMv2_0991_39 HRGMv2_0991_39_11 11021 11968 + ATPgrasp_TupA
TC HRGMv2_0991_39 HRGMv2_0991_39_12 12053 13519 + 2.A.66.2.23
Gene ID: HRGMv2_0991_39_4
Type: TC
Location: 3411 - 4211 (+)
Gene ID: HRGMv2_0991_39_5
Type: CAZyme
Location: 4215 - 5132 (+)
Gene ID: HRGMv2_0991_39_6
Type: pfam
Location: 5176 - 6447 (+)
Gene ID: HRGMv2_0991_39_7
Type: CAZyme
Location: 6453 - 7745 (+)
Gene ID: HRGMv2_0991_39_8
Type: pfam
Location: 7745 - 8692 (+)
Gene ID: HRGMv2_0991_39_9
Type: CAZyme
Location: 8689 - 9792 (+)
Gene ID: HRGMv2_0991_39_10
Type: pfam
Location: 9789 - 10877 (+)
Gene ID: HRGMv2_0991_39_11
Type: pfam
Location: 11021 - 11968 (+)
Gene ID: HRGMv2_0991_39_12
Type: TC
Location: 12053 - 13519 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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