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Cluster: HRGMv2_0991_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0991_20 HRGMv2_0991_20_25 28270 29064 - 3.A.1.34.1
TC HRGMv2_0991_20 HRGMv2_0991_20_26 29057 29980 - 3.A.1.34.1
TC HRGMv2_0991_20 HRGMv2_0991_20_27 30185 31165 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0991_20 HRGMv2_0991_20_28 31326 32111 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0991_20 HRGMv2_0991_20_29 32361 33764 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0991_20 HRGMv2_0991_20_30 33946 34509 - 4.A.1.2.6
peptidase HRGMv2_0991_20 HRGMv2_0991_20_31 34754 35653 + S09.UPW
NULL(UNKNOWN) HRGMv2_0991_20 HRGMv2_0991_20_32 35701 36021 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0991_20 HRGMv2_0991_20_33 36143 38503 + 9.A.8.1.6
TC HRGMv2_0991_20 HRGMv2_0991_20_34 38628 39824 + 2.A.1.2.18
CAZyme HRGMv2_0991_20 HRGMv2_0991_20_35 39978 41354 + GH13_20
Gene ID: HRGMv2_0991_20_25
Type: TC
Location: 28270 - 29064 (-)
Gene ID: HRGMv2_0991_20_26
Type: TC
Location: 29057 - 29980 (-)
Gene ID: HRGMv2_0991_20_27
Type: TC
Location: 30185 - 31165 (-)
Gene ID: HRGMv2_0991_20_28
Type:
Location: 31326 - 32111 (-)
Gene ID: HRGMv2_0991_20_29
Type: pfam
Location: 32361 - 33764 (-)
Gene ID: HRGMv2_0991_20_30
Type: TC
Location: 33946 - 34509 (-)
Gene ID: HRGMv2_0991_20_31
Type: peptidase
Location: 34754 - 35653 (+)
Gene ID: HRGMv2_0991_20_32
Type:
Location: 35701 - 36021 (+)
Gene ID: HRGMv2_0991_20_33
Type: TC
Location: 36143 - 38503 (+)
Gene ID: HRGMv2_0991_20_34
Type: TC
Location: 38628 - 39824 (+)
Gene ID: HRGMv2_0991_20_35
Type: CAZyme
Location: 39978 - 41354 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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