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Cluster: HRGMv2_0991_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0991_15 HRGMv2_0991_15_5 3152 3490 - 4.A.3.1.2
TF HRGMv2_0991_15 HRGMv2_0991_15_6 3705 4709 - LacI
TC HRGMv2_0991_15 HRGMv2_0991_15_7 5067 6842 + 4.A.3.1.1
CAZyme HRGMv2_0991_15 HRGMv2_0991_15_8 6909 8348 + GH1
TF HRGMv2_0991_15 HRGMv2_0991_15_9 8616 9653 - LacI
CAZyme HRGMv2_0991_15 HRGMv2_0991_15_10 9995 11437 + GH1
TC HRGMv2_0991_15 HRGMv2_0991_15_11 11615 13375 + 4.A.3.1.1
TF HRGMv2_0991_15 HRGMv2_0991_15_12 13549 14559 - LacI
TC HRGMv2_0991_15 HRGMv2_0991_15_13 14834 16612 + 4.A.3.1.1
CAZyme HRGMv2_0991_15 HRGMv2_0991_15_14 16688 18109 + GH1
Gene ID: HRGMv2_0991_15_5
Type: TC
Location: 3152 - 3490 (-)
Gene ID: HRGMv2_0991_15_6
Type: TF
Location: 3705 - 4709 (-)
Gene ID: HRGMv2_0991_15_7
Type: TC
Location: 5067 - 6842 (+)
Gene ID: HRGMv2_0991_15_8
Type: CAZyme
Location: 6909 - 8348 (+)
Gene ID: HRGMv2_0991_15_9
Type: TF
Location: 8616 - 9653 (-)
Gene ID: HRGMv2_0991_15_10
Type: CAZyme
Location: 9995 - 11437 (+)
Gene ID: HRGMv2_0991_15_11
Type: TC
Location: 11615 - 13375 (+)
Gene ID: HRGMv2_0991_15_12
Type: TF
Location: 13549 - 14559 (-)
Gene ID: HRGMv2_0991_15_13
Type: TC
Location: 14834 - 16612 (+)
Gene ID: HRGMv2_0991_15_14
Type: CAZyme
Location: 16688 - 18109 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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