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Cluster: HRGMv2_0988_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0988_11 HRGMv2_0988_11_4 4140 5522 - GH4
TC HRGMv2_0988_11 HRGMv2_0988_11_5 5526 7142 - 4.A.1.1.3
pfam HRGMv2_0988_11 HRGMv2_0988_11_6 7242 8108 - PRD | PRD | CAT_RBD
TC HRGMv2_0988_11 HRGMv2_0988_11_7 8115 8627 - 4.A.1.2.5
TC HRGMv2_0988_11 HRGMv2_0988_11_8 9105 11354 - 1.I.1.1.3
TC HRGMv2_0988_11 HRGMv2_0988_11_9 11915 14260 + 3.A.3.5.15
Gene ID: HRGMv2_0988_11_4
Type: CAZyme
Location: 4140 - 5522 (-)
Gene ID: HRGMv2_0988_11_5
Type: TC
Location: 5526 - 7142 (-)
Gene ID: HRGMv2_0988_11_6
Type: pfam
Location: 7242 - 8108 (-)
Gene ID: HRGMv2_0988_11_7
Type: TC
Location: 8115 - 8627 (-)
Gene ID: HRGMv2_0988_11_8
Type: TC
Location: 9105 - 11354 (-)
Gene ID: HRGMv2_0988_11_9
Type: TC
Location: 11915 - 14260 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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