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Cluster: HRGMv2_0988_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0988_6 HRGMv2_0988_6_34 34463 34906 + 4.A.6.1.16
pfam HRGMv2_0988_6 HRGMv2_0988_6_35 34906 35187 + YajC
TC HRGMv2_0988_6 HRGMv2_0988_6_36 35224 35706 + 4.A.6.1.4
TC HRGMv2_0988_6 HRGMv2_0988_6_37 35797 36597 + 4.A.6.1.4
TC HRGMv2_0988_6 HRGMv2_0988_6_38 36587 37669 + 4.A.6.1.4
TF HRGMv2_0988_6 HRGMv2_0988_6_39 37855 38586 + GntR
STP HRGMv2_0988_6 HRGMv2_0988_6_40 38701 39867 + SIS | SIS
CAZyme HRGMv2_0988_6 HRGMv2_0988_6_41 39985 41154 + CE9
Gene ID: HRGMv2_0988_6_34
Type: TC
Location: 34463 - 34906 (+)
Gene ID: HRGMv2_0988_6_35
Type: pfam
Location: 34906 - 35187 (+)
Gene ID: HRGMv2_0988_6_36
Type: TC
Location: 35224 - 35706 (+)
Gene ID: HRGMv2_0988_6_37
Type: TC
Location: 35797 - 36597 (+)
Gene ID: HRGMv2_0988_6_38
Type: TC
Location: 36587 - 37669 (+)
Gene ID: HRGMv2_0988_6_39
Type: TF
Location: 37855 - 38586 (+)
Gene ID: HRGMv2_0988_6_40
Type: STP
Location: 38701 - 39867 (+)
Gene ID: HRGMv2_0988_6_41
Type: CAZyme
Location: 39985 - 41154 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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