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Cluster: HRGMv2_0988_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0988_6 HRGMv2_0988_6_3 2258 3658 + GH1
TC HRGMv2_0988_6 HRGMv2_0988_6_4 3778 5121 + 4.A.3.2.9
TC HRGMv2_0988_6 HRGMv2_0988_6_5 5283 5585 + 4.A.3.2.9
TC HRGMv2_0988_6 HRGMv2_0988_6_6 5595 5927 + 4.A.3.2.3
STP HRGMv2_0988_6 HRGMv2_0988_6_7 6169 7122 + Glucokinase
pfam HRGMv2_0988_6 HRGMv2_0988_6_8 7291 8214 + DHH | DHHA2
TC HRGMv2_0988_6 HRGMv2_0988_6_9 8482 9840 + 2.A.33.1.1
Gene ID: HRGMv2_0988_6_3
Type: CAZyme
Location: 2258 - 3658 (+)
Gene ID: HRGMv2_0988_6_4
Type: TC
Location: 3778 - 5121 (+)
Gene ID: HRGMv2_0988_6_5
Type: TC
Location: 5283 - 5585 (+)
Gene ID: HRGMv2_0988_6_6
Type: TC
Location: 5595 - 5927 (+)
Gene ID: HRGMv2_0988_6_7
Type: STP
Location: 6169 - 7122 (+)
Gene ID: HRGMv2_0988_6_8
Type: pfam
Location: 7291 - 8214 (+)
Gene ID: HRGMv2_0988_6_9
Type: TC
Location: 8482 - 9840 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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