Cluster: HRGMv2_0988_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0988
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0988_2 | HRGMv2_0988_2_14 | 19286 | 20668 | + | GH32 |
| TC | HRGMv2_0988_2 | HRGMv2_0988_2_15 | 20714 | 22165 | + | 4.A.1.2.9 |
| CAZyme | HRGMv2_0988_2 | HRGMv2_0988_2_16 | 22267 | 23709 | + | GH32 |
Gene ID: HRGMv2_0988_2_14
Type: CAZyme
Location: 19286 - 20668 (+)
Type: CAZyme
Location: 19286 - 20668 (+)
Gene ID: HRGMv2_0988_2_15
Type: TC
Location: 20714 - 22165 (+)
Type: TC
Location: 20714 - 22165 (+)
Gene ID: HRGMv2_0988_2_16
Type: CAZyme
Location: 22267 - 23709 (+)
Type: CAZyme
Location: 22267 - 23709 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_BA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.