Cluster: HRGMv2_0988_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0988
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0988_72 | HRGMv2_0988_72_3 | 1332 | 2204 | - | GT2 |
| TC | HRGMv2_0988_72 | HRGMv2_0988_72_4 | 2201 | 2845 | - | 9.B.18.1.2 |
| TC | HRGMv2_0988_72 | HRGMv2_0988_72_5 | 2838 | 3599 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_0988_72_3
Type: CAZyme
Location: 1332 - 2204 (-)
Type: CAZyme
Location: 1332 - 2204 (-)
Gene ID: HRGMv2_0988_72_4
Type: TC
Location: 2201 - 2845 (-)
Type: TC
Location: 2201 - 2845 (-)
Gene ID: HRGMv2_0988_72_5
Type: TC
Location: 2838 - 3599 (-)
Type: TC
Location: 2838 - 3599 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_BA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.