Cluster: HRGMv2_0988_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0988
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0988_40 | HRGMv2_0988_40_10 | 13431 | 14144 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_0988_40 | HRGMv2_0988_40_11 | 14144 | 14920 | + | GT26 |
| TC | HRGMv2_0988_40 | HRGMv2_0988_40_12 | 14921 | 15979 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_0988_40_10
Type: TC
Location: 13431 - 14144 (+)
Type: TC
Location: 13431 - 14144 (+)
Gene ID: HRGMv2_0988_40_11
Type: CAZyme
Location: 14144 - 14920 (+)
Type: CAZyme
Location: 14144 - 14920 (+)
Gene ID: HRGMv2_0988_40_12
Type: TC
Location: 14921 - 15979 (+)
Type: TC
Location: 14921 - 15979 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_BA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.