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Cluster: HRGMv2_0988_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0988_35 HRGMv2_0988_35_5 5271 6776 + GH77
CAZyme HRGMv2_0988_35 HRGMv2_0988_35_6 6905 9172 + GT35
TC HRGMv2_0988_35 HRGMv2_0988_35_7 9630 10829 - 3.A.1.1.22
TC HRGMv2_0988_35 HRGMv2_0988_35_8 10898 11737 - 3.A.1.1.45
TC HRGMv2_0988_35 HRGMv2_0988_35_9 11737 12591 - 3.A.1.1.45
TC HRGMv2_0988_35 HRGMv2_0988_35_10 12679 13995 - 3.A.1.1.45
TF HRGMv2_0988_35 HRGMv2_0988_35_11 14302 15021 - GntR
TC HRGMv2_0988_35 HRGMv2_0988_35_12 15251 17701 + 4.A.1.1.8
Gene ID: HRGMv2_0988_35_5
Type: CAZyme
Location: 5271 - 6776 (+)
Gene ID: HRGMv2_0988_35_6
Type: CAZyme
Location: 6905 - 9172 (+)
Gene ID: HRGMv2_0988_35_7
Type: TC
Location: 9630 - 10829 (-)
Gene ID: HRGMv2_0988_35_8
Type: TC
Location: 10898 - 11737 (-)
Gene ID: HRGMv2_0988_35_9
Type: TC
Location: 11737 - 12591 (-)
Gene ID: HRGMv2_0988_35_10
Type: TC
Location: 12679 - 13995 (-)
Gene ID: HRGMv2_0988_35_11
Type: TF
Location: 14302 - 15021 (-)
Gene ID: HRGMv2_0988_35_12
Type: TC
Location: 15251 - 17701 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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