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Cluster: HRGMv2_0988_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0988_24 HRGMv2_0988_24_11 9589 10515 - CE7
TC HRGMv2_0988_24 HRGMv2_0988_24_12 10647 11474 - 3.A.1.5.27
TC HRGMv2_0988_24 HRGMv2_0988_24_13 11475 13490 - 3.A.1.5.25
TC HRGMv2_0988_24 HRGMv2_0988_24_14 13494 14450 - 3.A.1.5.38
TC HRGMv2_0988_24 HRGMv2_0988_24_15 14606 16219 - 3.A.1.5.27
pfam HRGMv2_0988_24 HRGMv2_0988_24_16 16585 18525 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0988_24 HRGMv2_0988_24_17 18532 20214 - 2.A.66.4.4
Gene ID: HRGMv2_0988_24_11
Type: CAZyme
Location: 9589 - 10515 (-)
Gene ID: HRGMv2_0988_24_12
Type: TC
Location: 10647 - 11474 (-)
Gene ID: HRGMv2_0988_24_13
Type: TC
Location: 11475 - 13490 (-)
Gene ID: HRGMv2_0988_24_14
Type: TC
Location: 13494 - 14450 (-)
Gene ID: HRGMv2_0988_24_15
Type: TC
Location: 14606 - 16219 (-)
Gene ID: HRGMv2_0988_24_16
Type: pfam
Location: 16585 - 18525 (-)
Gene ID: HRGMv2_0988_24_17
Type: TC
Location: 18532 - 20214 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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