Cluster: HRGMv2_0988_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0988
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0988_22 | HRGMv2_0988_22_8 | 6274 | 7680 | + | CE4 |
| STP | HRGMv2_0988_22 | HRGMv2_0988_22_9 | 8009 | 9853 | + | CBS | CBS |
| TC | HRGMv2_0988_22 | HRGMv2_0988_22_10 | 9862 | 11124 | + | 2.A.55.3.6 |
| TC | HRGMv2_0988_22 | HRGMv2_0988_22_11 | 11640 | 13856 | - | 9.B.97.5.1 |
Gene ID: HRGMv2_0988_22_8
Type: CAZyme
Location: 6274 - 7680 (+)
Type: CAZyme
Location: 6274 - 7680 (+)
Gene ID: HRGMv2_0988_22_9
Type: STP
Location: 8009 - 9853 (+)
Type: STP
Location: 8009 - 9853 (+)
Gene ID: HRGMv2_0988_22_10
Type: TC
Location: 9862 - 11124 (+)
Type: TC
Location: 9862 - 11124 (+)
Gene ID: HRGMv2_0988_22_11
Type: TC
Location: 11640 - 13856 (-)
Type: TC
Location: 11640 - 13856 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_BA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.