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Cluster: HRGMv2_0985_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0985_14 HRGMv2_0985_14_24 24862 25305 + 4.A.6.1.16
pfam HRGMv2_0985_14 HRGMv2_0985_14_25 25305 25586 + YajC
TC HRGMv2_0985_14 HRGMv2_0985_14_26 25623 26105 + 4.A.6.1.4
TC HRGMv2_0985_14 HRGMv2_0985_14_27 26196 26996 + 4.A.6.1.4
TC HRGMv2_0985_14 HRGMv2_0985_14_28 26986 28068 + 4.A.6.1.4
TF HRGMv2_0985_14 HRGMv2_0985_14_29 28253 28984 + GntR
STP HRGMv2_0985_14 HRGMv2_0985_14_30 29099 30265 + SIS | SIS
CAZyme HRGMv2_0985_14 HRGMv2_0985_14_31 30383 31552 + CE9
Gene ID: HRGMv2_0985_14_24
Type: TC
Location: 24862 - 25305 (+)
Gene ID: HRGMv2_0985_14_25
Type: pfam
Location: 25305 - 25586 (+)
Gene ID: HRGMv2_0985_14_26
Type: TC
Location: 25623 - 26105 (+)
Gene ID: HRGMv2_0985_14_27
Type: TC
Location: 26196 - 26996 (+)
Gene ID: HRGMv2_0985_14_28
Type: TC
Location: 26986 - 28068 (+)
Gene ID: HRGMv2_0985_14_29
Type: TF
Location: 28253 - 28984 (+)
Gene ID: HRGMv2_0985_14_30
Type: STP
Location: 29099 - 30265 (+)
Gene ID: HRGMv2_0985_14_31
Type: CAZyme
Location: 30383 - 31552 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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