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Cluster: HRGMv2_0983_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0983_3 HRGMv2_0983_3_75 81066 82571 + GH77
CAZyme HRGMv2_0983_3 HRGMv2_0983_3_76 82700 84967 + GT35
TC HRGMv2_0983_3 HRGMv2_0983_3_77 85423 86622 - 3.A.1.1.22
TC HRGMv2_0983_3 HRGMv2_0983_3_78 86691 87530 - 3.A.1.1.45
TC HRGMv2_0983_3 HRGMv2_0983_3_79 87530 88384 - 3.A.1.1.45
TC HRGMv2_0983_3 HRGMv2_0983_3_80 88472 89788 - 3.A.1.1.45
TF HRGMv2_0983_3 HRGMv2_0983_3_81 90095 90814 - GntR
NULL(UNKNOWN) HRGMv2_0983_3 HRGMv2_0983_3_82 90898 91017 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0983_3 HRGMv2_0983_3_83 91039 93489 + 4.A.1.1.8
Gene ID: HRGMv2_0983_3_75
Type: CAZyme
Location: 81066 - 82571 (+)
Gene ID: HRGMv2_0983_3_76
Type: CAZyme
Location: 82700 - 84967 (+)
Gene ID: HRGMv2_0983_3_77
Type: TC
Location: 85423 - 86622 (-)
Gene ID: HRGMv2_0983_3_78
Type: TC
Location: 86691 - 87530 (-)
Gene ID: HRGMv2_0983_3_79
Type: TC
Location: 87530 - 88384 (-)
Gene ID: HRGMv2_0983_3_80
Type: TC
Location: 88472 - 89788 (-)
Gene ID: HRGMv2_0983_3_81
Type: TF
Location: 90095 - 90814 (-)
Gene ID: HRGMv2_0983_3_82
Type:
Location: 90898 - 91017 (-)
Gene ID: HRGMv2_0983_3_83
Type: TC
Location: 91039 - 93489 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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