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Cluster: HRGMv2_0982_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0982_23 HRGMv2_0982_23_3 3258 5708 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0982_23 HRGMv2_0982_23_4 5730 5849 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0982_23 HRGMv2_0982_23_5 5933 6652 + GntR
TC HRGMv2_0982_23 HRGMv2_0982_23_6 6959 8275 + 3.A.1.1.45
TC HRGMv2_0982_23 HRGMv2_0982_23_7 8363 9217 + 3.A.1.1.45
TC HRGMv2_0982_23 HRGMv2_0982_23_8 9217 10056 + 3.A.1.1.45
TC HRGMv2_0982_23 HRGMv2_0982_23_9 10125 11324 + 3.A.1.1.22
CAZyme HRGMv2_0982_23 HRGMv2_0982_23_10 11781 14048 - GT35
CAZyme HRGMv2_0982_23 HRGMv2_0982_23_11 14178 15683 - GH77
Gene ID: HRGMv2_0982_23_3
Type: TC
Location: 3258 - 5708 (-)
Gene ID: HRGMv2_0982_23_4
Type:
Location: 5730 - 5849 (+)
Gene ID: HRGMv2_0982_23_5
Type: TF
Location: 5933 - 6652 (+)
Gene ID: HRGMv2_0982_23_6
Type: TC
Location: 6959 - 8275 (+)
Gene ID: HRGMv2_0982_23_7
Type: TC
Location: 8363 - 9217 (+)
Gene ID: HRGMv2_0982_23_8
Type: TC
Location: 9217 - 10056 (+)
Gene ID: HRGMv2_0982_23_9
Type: TC
Location: 10125 - 11324 (+)
Gene ID: HRGMv2_0982_23_10
Type: CAZyme
Location: 11781 - 14048 (-)
Gene ID: HRGMv2_0982_23_11
Type: CAZyme
Location: 14178 - 15683 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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