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Cluster: HRGMv2_0982_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0982_11 HRGMv2_0982_11_9 10940 13282 - 3.A.3.5.15
STP HRGMv2_0982_11 HRGMv2_0982_11_10 13695 15779 - Pkinase
STP HRGMv2_0982_11 HRGMv2_0982_11_11 15951 16913 - FHA
TC HRGMv2_0982_11 HRGMv2_0982_11_12 17410 19650 + 1.I.1.1.3
STP HRGMv2_0982_11 HRGMv2_0982_11_13 20268 21029 + Fer4
TC HRGMv2_0982_11 HRGMv2_0982_11_14 21310 21822 + 4.A.1.2.5
pfam HRGMv2_0982_11 HRGMv2_0982_11_15 21841 22695 + PRD | PRD | CAT_RBD
TC HRGMv2_0982_11 HRGMv2_0982_11_16 22795 24411 + 4.A.1.1.3
CAZyme HRGMv2_0982_11 HRGMv2_0982_11_17 24415 25797 + GH4
Gene ID: HRGMv2_0982_11_9
Type: TC
Location: 10940 - 13282 (-)
Gene ID: HRGMv2_0982_11_10
Type: STP
Location: 13695 - 15779 (-)
Gene ID: HRGMv2_0982_11_11
Type: STP
Location: 15951 - 16913 (-)
Gene ID: HRGMv2_0982_11_12
Type: TC
Location: 17410 - 19650 (+)
Gene ID: HRGMv2_0982_11_13
Type: STP
Location: 20268 - 21029 (+)
Gene ID: HRGMv2_0982_11_14
Type: TC
Location: 21310 - 21822 (+)
Gene ID: HRGMv2_0982_11_15
Type: pfam
Location: 21841 - 22695 (+)
Gene ID: HRGMv2_0982_11_16
Type: TC
Location: 22795 - 24411 (+)
Gene ID: HRGMv2_0982_11_17
Type: CAZyme
Location: 24415 - 25797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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