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Cluster: HRGMv2_0981_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0981_12 HRGMv2_0981_12_11 11958 13340 - GH4
TC HRGMv2_0981_12 HRGMv2_0981_12_12 13344 14960 - 4.A.1.1.3
pfam HRGMv2_0981_12 HRGMv2_0981_12_13 15060 15926 - PRD | PRD | CAT_RBD
TC HRGMv2_0981_12 HRGMv2_0981_12_14 15933 16445 - 4.A.1.2.2
TC HRGMv2_0981_12 HRGMv2_0981_12_15 16922 19165 - 1.I.1.1.3
STP HRGMv2_0981_12 HRGMv2_0981_12_16 19765 20727 + FHA
STP HRGMv2_0981_12 HRGMv2_0981_12_17 20899 22983 + Pkinase
TC HRGMv2_0981_12 HRGMv2_0981_12_18 23397 25739 + 3.A.3.5.15
Gene ID: HRGMv2_0981_12_11
Type: CAZyme
Location: 11958 - 13340 (-)
Gene ID: HRGMv2_0981_12_12
Type: TC
Location: 13344 - 14960 (-)
Gene ID: HRGMv2_0981_12_13
Type: pfam
Location: 15060 - 15926 (-)
Gene ID: HRGMv2_0981_12_14
Type: TC
Location: 15933 - 16445 (-)
Gene ID: HRGMv2_0981_12_15
Type: TC
Location: 16922 - 19165 (-)
Gene ID: HRGMv2_0981_12_16
Type: STP
Location: 19765 - 20727 (+)
Gene ID: HRGMv2_0981_12_17
Type: STP
Location: 20899 - 22983 (+)
Gene ID: HRGMv2_0981_12_18
Type: TC
Location: 23397 - 25739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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