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Cluster: HRGMv2_0981_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0981_2 HRGMv2_0981_2_99 101235 102740 + GH77
CAZyme HRGMv2_0981_2 HRGMv2_0981_2_100 102870 105137 + GT35
TC HRGMv2_0981_2 HRGMv2_0981_2_101 105514 106713 - 3.A.1.1.22
TC HRGMv2_0981_2 HRGMv2_0981_2_102 106782 107621 - 3.A.1.1.45
TC HRGMv2_0981_2 HRGMv2_0981_2_103 107621 108475 - 3.A.1.1.45
TC HRGMv2_0981_2 HRGMv2_0981_2_104 108563 109879 - 3.A.1.1.45
TF HRGMv2_0981_2 HRGMv2_0981_2_105 110186 110905 - GntR
TC HRGMv2_0981_2 HRGMv2_0981_2_106 111133 113583 + 4.A.1.1.8
Gene ID: HRGMv2_0981_2_99
Type: CAZyme
Location: 101235 - 102740 (+)
Gene ID: HRGMv2_0981_2_100
Type: CAZyme
Location: 102870 - 105137 (+)
Gene ID: HRGMv2_0981_2_101
Type: TC
Location: 105514 - 106713 (-)
Gene ID: HRGMv2_0981_2_102
Type: TC
Location: 106782 - 107621 (-)
Gene ID: HRGMv2_0981_2_103
Type: TC
Location: 107621 - 108475 (-)
Gene ID: HRGMv2_0981_2_104
Type: TC
Location: 108563 - 109879 (-)
Gene ID: HRGMv2_0981_2_105
Type: TF
Location: 110186 - 110905 (-)
Gene ID: HRGMv2_0981_2_106
Type: TC
Location: 111133 - 113583 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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