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Cluster: HRGMv2_0981_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0981_26 HRGMv2_0981_26_5 4492 6186 + 4.A.3.1.1
STP HRGMv2_0981_26 HRGMv2_0981_26_6 6349 6744 + DeoRC
pfam HRGMv2_0981_26 HRGMv2_0981_26_7 6853 8085 - Fic
CAZyme HRGMv2_0981_26 HRGMv2_0981_26_8 8453 9874 - GH1
TC HRGMv2_0981_26 HRGMv2_0981_26_9 9950 11728 - 4.A.3.1.1
TF HRGMv2_0981_26 HRGMv2_0981_26_10 12004 13014 + LacI
CAZyme HRGMv2_0981_26 HRGMv2_0981_26_11 13202 14641 - GH1
TC HRGMv2_0981_26 HRGMv2_0981_26_12 14708 16474 - 4.A.3.1.1
TF HRGMv2_0981_26 HRGMv2_0981_26_13 16832 17836 + LacI
TC HRGMv2_0981_26 HRGMv2_0981_26_14 18051 18389 + 4.A.3.1.2
Gene ID: HRGMv2_0981_26_5
Type: TC
Location: 4492 - 6186 (+)
Gene ID: HRGMv2_0981_26_6
Type: STP
Location: 6349 - 6744 (+)
Gene ID: HRGMv2_0981_26_7
Type: pfam
Location: 6853 - 8085 (-)
Gene ID: HRGMv2_0981_26_8
Type: CAZyme
Location: 8453 - 9874 (-)
Gene ID: HRGMv2_0981_26_9
Type: TC
Location: 9950 - 11728 (-)
Gene ID: HRGMv2_0981_26_10
Type: TF
Location: 12004 - 13014 (+)
Gene ID: HRGMv2_0981_26_11
Type: CAZyme
Location: 13202 - 14641 (-)
Gene ID: HRGMv2_0981_26_12
Type: TC
Location: 14708 - 16474 (-)
Gene ID: HRGMv2_0981_26_13
Type: TF
Location: 16832 - 17836 (+)
Gene ID: HRGMv2_0981_26_14
Type: TC
Location: 18051 - 18389 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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