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Cluster: HRGMv2_0981_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0981_20 HRGMv2_0981_20_17 17370 18296 - CE7
TC HRGMv2_0981_20 HRGMv2_0981_20_18 18428 19255 - 3.A.1.5.27
TC HRGMv2_0981_20 HRGMv2_0981_20_19 19256 21271 - 3.A.1.5.25
TC HRGMv2_0981_20 HRGMv2_0981_20_20 21275 22231 - 3.A.1.5.38
TC HRGMv2_0981_20 HRGMv2_0981_20_21 22389 24002 - 3.A.1.5.27
pfam HRGMv2_0981_20 HRGMv2_0981_20_22 24367 26307 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0981_20 HRGMv2_0981_20_23 26314 27996 - 2.A.66.4.4
Gene ID: HRGMv2_0981_20_17
Type: CAZyme
Location: 17370 - 18296 (-)
Gene ID: HRGMv2_0981_20_18
Type: TC
Location: 18428 - 19255 (-)
Gene ID: HRGMv2_0981_20_19
Type: TC
Location: 19256 - 21271 (-)
Gene ID: HRGMv2_0981_20_20
Type: TC
Location: 21275 - 22231 (-)
Gene ID: HRGMv2_0981_20_21
Type: TC
Location: 22389 - 24002 (-)
Gene ID: HRGMv2_0981_20_22
Type: pfam
Location: 24367 - 26307 (-)
Gene ID: HRGMv2_0981_20_23
Type: TC
Location: 26314 - 27996 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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