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Cluster: HRGMv2_0981_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0981_1 HRGMv2_0981_1_63 69092 70468 - GH13_20
TC HRGMv2_0981_1 HRGMv2_0981_1_64 70622 71818 - 2.A.1.2.18
TC HRGMv2_0981_1 HRGMv2_0981_1_65 71940 74300 - 9.A.8.1.6
peptidase HRGMv2_0981_1 HRGMv2_0981_1_66 74774 75673 - S09.UPW
TC HRGMv2_0981_1 HRGMv2_0981_1_67 75917 76480 + 4.A.1.2.6
pfam HRGMv2_0981_1 HRGMv2_0981_1_68 76662 78065 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0981_1 HRGMv2_0981_1_69 78324 79109 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0981_1 HRGMv2_0981_1_70 79270 80250 + 3.A.1.34.1
TC HRGMv2_0981_1 HRGMv2_0981_1_71 80454 81377 + 3.A.1.34.1
TC HRGMv2_0981_1 HRGMv2_0981_1_72 81370 82164 + 3.A.1.34.1
Gene ID: HRGMv2_0981_1_63
Type: CAZyme
Location: 69092 - 70468 (-)
Gene ID: HRGMv2_0981_1_64
Type: TC
Location: 70622 - 71818 (-)
Gene ID: HRGMv2_0981_1_65
Type: TC
Location: 71940 - 74300 (-)
Gene ID: HRGMv2_0981_1_66
Type: peptidase
Location: 74774 - 75673 (-)
Gene ID: HRGMv2_0981_1_67
Type: TC
Location: 75917 - 76480 (+)
Gene ID: HRGMv2_0981_1_68
Type: pfam
Location: 76662 - 78065 (+)
Gene ID: HRGMv2_0981_1_69
Type:
Location: 78324 - 79109 (+)
Gene ID: HRGMv2_0981_1_70
Type: TC
Location: 79270 - 80250 (+)
Gene ID: HRGMv2_0981_1_71
Type: TC
Location: 80454 - 81377 (+)
Gene ID: HRGMv2_0981_1_72
Type: TC
Location: 81370 - 82164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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