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Cluster: HRGMv2_0980_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0980_12 HRGMv2_0980_12_10 9226 10902 + 3.A.1.5.35
TC HRGMv2_0980_12 HRGMv2_0980_12_11 11059 12096 + 3.A.1.5.37
TC HRGMv2_0980_12 HRGMv2_0980_12_12 12111 13046 + 3.A.1.5.11
TC HRGMv2_0980_12 HRGMv2_0980_12_13 13049 14140 + 3.A.1.5.34
TC HRGMv2_0980_12 HRGMv2_0980_12_14 14140 15168 + 3.A.1.5.37
STP HRGMv2_0980_12 HRGMv2_0980_12_15 15908 18253 + GAF | SpoIIE
STP HRGMv2_0980_12 HRGMv2_0980_12_16 18332 19078 + STAS
CAZyme HRGMv2_0980_12 HRGMv2_0980_12_17 19822 21555 + GH13_30
Gene ID: HRGMv2_0980_12_10
Type: TC
Location: 9226 - 10902 (+)
Gene ID: HRGMv2_0980_12_11
Type: TC
Location: 11059 - 12096 (+)
Gene ID: HRGMv2_0980_12_12
Type: TC
Location: 12111 - 13046 (+)
Gene ID: HRGMv2_0980_12_13
Type: TC
Location: 13049 - 14140 (+)
Gene ID: HRGMv2_0980_12_14
Type: TC
Location: 14140 - 15168 (+)
Gene ID: HRGMv2_0980_12_15
Type: STP
Location: 15908 - 18253 (+)
Gene ID: HRGMv2_0980_12_16
Type: STP
Location: 18332 - 19078 (+)
Gene ID: HRGMv2_0980_12_17
Type: CAZyme
Location: 19822 - 21555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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