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Cluster: HRGMv2_0980_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0980_5 HRGMv2_0980_5_62 84981 86363 - GH4
TC HRGMv2_0980_5 HRGMv2_0980_5_63 86367 87983 - 4.A.1.1.3
pfam HRGMv2_0980_5 HRGMv2_0980_5_64 88083 88937 - PRD | PRD | CAT_RBD
TC HRGMv2_0980_5 HRGMv2_0980_5_65 88956 89468 - 4.A.1.2.5
NULL(UNKNOWN) HRGMv2_0980_5 HRGMv2_0980_5_66 89812 90573 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0980_5 HRGMv2_0980_5_67 91198 93441 - 1.I.1.1.3
STP HRGMv2_0980_5 HRGMv2_0980_5_68 93949 94911 + FHA
STP HRGMv2_0980_5 HRGMv2_0980_5_69 95083 97167 + Pkinase
TC HRGMv2_0980_5 HRGMv2_0980_5_70 97419 99761 + 3.A.3.5.15
Gene ID: HRGMv2_0980_5_62
Type: CAZyme
Location: 84981 - 86363 (-)
Gene ID: HRGMv2_0980_5_63
Type: TC
Location: 86367 - 87983 (-)
Gene ID: HRGMv2_0980_5_64
Type: pfam
Location: 88083 - 88937 (-)
Gene ID: HRGMv2_0980_5_65
Type: TC
Location: 88956 - 89468 (-)
Gene ID: HRGMv2_0980_5_66
Type:
Location: 89812 - 90573 (-)
Gene ID: HRGMv2_0980_5_67
Type: TC
Location: 91198 - 93441 (-)
Gene ID: HRGMv2_0980_5_68
Type: STP
Location: 93949 - 94911 (+)
Gene ID: HRGMv2_0980_5_69
Type: STP
Location: 95083 - 97167 (+)
Gene ID: HRGMv2_0980_5_70
Type: TC
Location: 97419 - 99761 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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