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Cluster: HRGMv2_0979_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0979_22 HRGMv2_0979_22_5 5099 7549 - 4.A.1.1.8
TF HRGMv2_0979_22 HRGMv2_0979_22_6 7779 8498 + GntR
TC HRGMv2_0979_22 HRGMv2_0979_22_7 8805 10121 + 3.A.1.1.45
TC HRGMv2_0979_22 HRGMv2_0979_22_8 10209 11063 + 3.A.1.1.45
TC HRGMv2_0979_22 HRGMv2_0979_22_9 11063 11902 + 3.A.1.1.45
TC HRGMv2_0979_22 HRGMv2_0979_22_10 11971 13170 + 3.A.1.1.22
CAZyme HRGMv2_0979_22 HRGMv2_0979_22_11 13544 15811 - GT35
CAZyme HRGMv2_0979_22 HRGMv2_0979_22_12 15940 17445 - GH77
Gene ID: HRGMv2_0979_22_5
Type: TC
Location: 5099 - 7549 (-)
Gene ID: HRGMv2_0979_22_6
Type: TF
Location: 7779 - 8498 (+)
Gene ID: HRGMv2_0979_22_7
Type: TC
Location: 8805 - 10121 (+)
Gene ID: HRGMv2_0979_22_8
Type: TC
Location: 10209 - 11063 (+)
Gene ID: HRGMv2_0979_22_9
Type: TC
Location: 11063 - 11902 (+)
Gene ID: HRGMv2_0979_22_10
Type: TC
Location: 11971 - 13170 (+)
Gene ID: HRGMv2_0979_22_11
Type: CAZyme
Location: 13544 - 15811 (-)
Gene ID: HRGMv2_0979_22_12
Type: CAZyme
Location: 15940 - 17445 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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