Cluster: HRGMv2_0978_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0978
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0978_3 | HRGMv2_0978_3_66 | 77220 | 78602 | + | GH32 |
| TC | HRGMv2_0978_3 | HRGMv2_0978_3_67 | 78648 | 80099 | + | 4.A.1.2.8 |
| CAZyme | HRGMv2_0978_3 | HRGMv2_0978_3_68 | 80201 | 81643 | + | GH32 |
Gene ID: HRGMv2_0978_3_66
Type: CAZyme
Location: 77220 - 78602 (+)
Type: CAZyme
Location: 77220 - 78602 (+)
Gene ID: HRGMv2_0978_3_67
Type: TC
Location: 78648 - 80099 (+)
Type: TC
Location: 78648 - 80099 (+)
Gene ID: HRGMv2_0978_3_68
Type: CAZyme
Location: 80201 - 81643 (+)
Type: CAZyme
Location: 80201 - 81643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AU
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.