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Cluster: HRGMv2_0978_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0978_3 HRGMv2_0978_3_9 8745 9188 + 4.A.6.1.16
pfam HRGMv2_0978_3 HRGMv2_0978_3_10 9188 9469 + YajC
TC HRGMv2_0978_3 HRGMv2_0978_3_11 9506 9988 + 4.A.6.1.4
TC HRGMv2_0978_3 HRGMv2_0978_3_12 10079 10879 + 4.A.6.1.4
TC HRGMv2_0978_3 HRGMv2_0978_3_13 10869 11951 + 4.A.6.1.4
TF HRGMv2_0978_3 HRGMv2_0978_3_14 12137 12868 + GntR
STP HRGMv2_0978_3 HRGMv2_0978_3_15 12983 14149 + SIS | SIS
CAZyme HRGMv2_0978_3 HRGMv2_0978_3_16 14267 15436 + CE9
Gene ID: HRGMv2_0978_3_9
Type: TC
Location: 8745 - 9188 (+)
Gene ID: HRGMv2_0978_3_10
Type: pfam
Location: 9188 - 9469 (+)
Gene ID: HRGMv2_0978_3_11
Type: TC
Location: 9506 - 9988 (+)
Gene ID: HRGMv2_0978_3_12
Type: TC
Location: 10079 - 10879 (+)
Gene ID: HRGMv2_0978_3_13
Type: TC
Location: 10869 - 11951 (+)
Gene ID: HRGMv2_0978_3_14
Type: TF
Location: 12137 - 12868 (+)
Gene ID: HRGMv2_0978_3_15
Type: STP
Location: 12983 - 14149 (+)
Gene ID: HRGMv2_0978_3_16
Type: CAZyme
Location: 14267 - 15436 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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