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Cluster: HRGMv2_0978_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0978_23 HRGMv2_0978_23_10 13620 15302 + 2.A.66.4.4
pfam HRGMv2_0978_23 HRGMv2_0978_23_11 15309 17249 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0978_23 HRGMv2_0978_23_12 17614 19227 + 3.A.1.5.27
TC HRGMv2_0978_23 HRGMv2_0978_23_13 19385 20341 + 3.A.1.5.38
TC HRGMv2_0978_23 HRGMv2_0978_23_14 20345 22360 + 3.A.1.5.25
TC HRGMv2_0978_23 HRGMv2_0978_23_15 22361 23188 + 3.A.1.5.27
CAZyme HRGMv2_0978_23 HRGMv2_0978_23_16 23320 24246 + CE7
Gene ID: HRGMv2_0978_23_10
Type: TC
Location: 13620 - 15302 (+)
Gene ID: HRGMv2_0978_23_11
Type: pfam
Location: 15309 - 17249 (+)
Gene ID: HRGMv2_0978_23_12
Type: TC
Location: 17614 - 19227 (+)
Gene ID: HRGMv2_0978_23_13
Type: TC
Location: 19385 - 20341 (+)
Gene ID: HRGMv2_0978_23_14
Type: TC
Location: 20345 - 22360 (+)
Gene ID: HRGMv2_0978_23_15
Type: TC
Location: 22361 - 23188 (+)
Gene ID: HRGMv2_0978_23_16
Type: CAZyme
Location: 23320 - 24246 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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