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Cluster: HRGMv2_0977_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0977_7 HRGMv2_0977_7_54 48851 50356 + GH77
CAZyme HRGMv2_0977_7 HRGMv2_0977_7_55 50485 52752 + GT35
TC HRGMv2_0977_7 HRGMv2_0977_7_56 53208 54407 - 3.A.1.1.22
TC HRGMv2_0977_7 HRGMv2_0977_7_57 54476 55315 - 3.A.1.1.45
TC HRGMv2_0977_7 HRGMv2_0977_7_58 55315 56169 - 3.A.1.1.45
TC HRGMv2_0977_7 HRGMv2_0977_7_59 56257 57573 - 3.A.1.1.45
TF HRGMv2_0977_7 HRGMv2_0977_7_60 57880 58599 - GntR
NULL(UNKNOWN) HRGMv2_0977_7 HRGMv2_0977_7_61 58683 58802 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0977_7 HRGMv2_0977_7_62 58824 61277 + 4.A.1.1.8
Gene ID: HRGMv2_0977_7_54
Type: CAZyme
Location: 48851 - 50356 (+)
Gene ID: HRGMv2_0977_7_55
Type: CAZyme
Location: 50485 - 52752 (+)
Gene ID: HRGMv2_0977_7_56
Type: TC
Location: 53208 - 54407 (-)
Gene ID: HRGMv2_0977_7_57
Type: TC
Location: 54476 - 55315 (-)
Gene ID: HRGMv2_0977_7_58
Type: TC
Location: 55315 - 56169 (-)
Gene ID: HRGMv2_0977_7_59
Type: TC
Location: 56257 - 57573 (-)
Gene ID: HRGMv2_0977_7_60
Type: TF
Location: 57880 - 58599 (-)
Gene ID: HRGMv2_0977_7_61
Type:
Location: 58683 - 58802 (-)
Gene ID: HRGMv2_0977_7_62
Type: TC
Location: 58824 - 61277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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