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Cluster: HRGMv2_0977_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0977_1 HRGMv2_0977_1_200 212025 214358 - 3.A.3.5.15
TC HRGMv2_0977_1 HRGMv2_0977_1_201 214920 217178 + 1.I.1.1.3
TC HRGMv2_0977_1 HRGMv2_0977_1_202 217554 218066 + 4.A.1.2.5
pfam HRGMv2_0977_1 HRGMv2_0977_1_203 218073 218939 + PRD | PRD | CAT_RBD
TC HRGMv2_0977_1 HRGMv2_0977_1_204 219039 220655 + 4.A.1.1.3
CAZyme HRGMv2_0977_1 HRGMv2_0977_1_205 220659 222041 + GH4
Gene ID: HRGMv2_0977_1_200
Type: TC
Location: 212025 - 214358 (-)
Gene ID: HRGMv2_0977_1_201
Type: TC
Location: 214920 - 217178 (+)
Gene ID: HRGMv2_0977_1_202
Type: TC
Location: 217554 - 218066 (+)
Gene ID: HRGMv2_0977_1_203
Type: pfam
Location: 218073 - 218939 (+)
Gene ID: HRGMv2_0977_1_204
Type: TC
Location: 219039 - 220655 (+)
Gene ID: HRGMv2_0977_1_205
Type: CAZyme
Location: 220659 - 222041 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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