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Cluster: HRGMv2_0977_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0977_22 HRGMv2_0977_22_13 10924 12720 + GH35
TC HRGMv2_0977_22 HRGMv2_0977_22_14 12723 13187 + 4.A.6.1.18
TC HRGMv2_0977_22 HRGMv2_0977_22_15 13281 14168 + 4.A.6.1.18
TC HRGMv2_0977_22 HRGMv2_0977_22_16 14158 14997 + 4.A.6.1.18
NULL(UNKNOWN) HRGMv2_0977_22 HRGMv2_0977_22_17 15186 15809 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0977_22 HRGMv2_0977_22_18 15891 16319 + 4.A.6.1.8
TF HRGMv2_0977_22 HRGMv2_0977_22_19 16407 17141 + GntR
STP HRGMv2_0977_22 HRGMv2_0977_22_20 17253 18419 + SIS | SIS
CAZyme HRGMv2_0977_22 HRGMv2_0977_22_21 18537 19706 + CE9
Gene ID: HRGMv2_0977_22_13
Type: CAZyme
Location: 10924 - 12720 (+)
Gene ID: HRGMv2_0977_22_14
Type: TC
Location: 12723 - 13187 (+)
Gene ID: HRGMv2_0977_22_15
Type: TC
Location: 13281 - 14168 (+)
Gene ID: HRGMv2_0977_22_16
Type: TC
Location: 14158 - 14997 (+)
Gene ID: HRGMv2_0977_22_17
Type:
Location: 15186 - 15809 (+)
Gene ID: HRGMv2_0977_22_18
Type: TC
Location: 15891 - 16319 (+)
Gene ID: HRGMv2_0977_22_19
Type: TF
Location: 16407 - 17141 (+)
Gene ID: HRGMv2_0977_22_20
Type: STP
Location: 17253 - 18419 (+)
Gene ID: HRGMv2_0977_22_21
Type: CAZyme
Location: 18537 - 19706 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0977_22_13 vegetarian > vegan 2.71827 0.01199
HRGMv2_0977_22_14 vegetarian > vegan 3.35046 0.01199
HRGMv2_0977_22_16 vegetarian > vegan 2.47759 0.01199

🧭 Explore Read Mapping of CGC

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