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Cluster: HRGMv2_0976_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0976_21 HRGMv2_0976_21_7 6320 6658 - 4.A.3.1.2
TF HRGMv2_0976_21 HRGMv2_0976_21_8 6873 7877 - LacI
TC HRGMv2_0976_21 HRGMv2_0976_21_9 8235 10010 + 4.A.3.1.1
CAZyme HRGMv2_0976_21 HRGMv2_0976_21_10 10077 11516 + GH1
TF HRGMv2_0976_21 HRGMv2_0976_21_11 11799 12836 - LacI
CAZyme HRGMv2_0976_21 HRGMv2_0976_21_12 13178 14620 + GH1
TC HRGMv2_0976_21 HRGMv2_0976_21_13 14796 16556 + 4.A.3.1.1
TF HRGMv2_0976_21 HRGMv2_0976_21_14 16887 17897 - LacI
TC HRGMv2_0976_21 HRGMv2_0976_21_15 18173 18337 + 4.A.3.1.1
Gene ID: HRGMv2_0976_21_7
Type: TC
Location: 6320 - 6658 (-)
Gene ID: HRGMv2_0976_21_8
Type: TF
Location: 6873 - 7877 (-)
Gene ID: HRGMv2_0976_21_9
Type: TC
Location: 8235 - 10010 (+)
Gene ID: HRGMv2_0976_21_10
Type: CAZyme
Location: 10077 - 11516 (+)
Gene ID: HRGMv2_0976_21_11
Type: TF
Location: 11799 - 12836 (-)
Gene ID: HRGMv2_0976_21_12
Type: CAZyme
Location: 13178 - 14620 (+)
Gene ID: HRGMv2_0976_21_13
Type: TC
Location: 14796 - 16556 (+)
Gene ID: HRGMv2_0976_21_14
Type: TF
Location: 16887 - 17897 (-)
Gene ID: HRGMv2_0976_21_15
Type: TC
Location: 18173 - 18337 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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