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Cluster: HRGMv2_0976_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0976_6 HRGMv2_0976_6_1 221 1201 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0976_6 HRGMv2_0976_6_2 1362 2144 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0976_6 HRGMv2_0976_6_3 2404 3807 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0976_6 HRGMv2_0976_6_4 3989 4552 - 4.A.1.2.6
peptidase HRGMv2_0976_6 HRGMv2_0976_6_5 4796 5695 + S09.UPW
TC HRGMv2_0976_6 HRGMv2_0976_6_6 6169 8529 + 9.A.8.1.6
TC HRGMv2_0976_6 HRGMv2_0976_6_7 8650 9846 + 2.A.1.2.18
CAZyme HRGMv2_0976_6 HRGMv2_0976_6_8 10000 11376 + GH13_20
Gene ID: HRGMv2_0976_6_1
Type: TC
Location: 221 - 1201 (-)
Gene ID: HRGMv2_0976_6_2
Type:
Location: 1362 - 2144 (-)
Gene ID: HRGMv2_0976_6_3
Type: pfam
Location: 2404 - 3807 (-)
Gene ID: HRGMv2_0976_6_4
Type: TC
Location: 3989 - 4552 (-)
Gene ID: HRGMv2_0976_6_5
Type: peptidase
Location: 4796 - 5695 (+)
Gene ID: HRGMv2_0976_6_6
Type: TC
Location: 6169 - 8529 (+)
Gene ID: HRGMv2_0976_6_7
Type: TC
Location: 8650 - 9846 (+)
Gene ID: HRGMv2_0976_6_8
Type: CAZyme
Location: 10000 - 11376 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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