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Cluster: HRGMv2_0975_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0975_8 HRGMv2_0975_8_18 16201 17895 + 4.A.3.1.1
STP HRGMv2_0975_8 HRGMv2_0975_8_19 18058 18438 + DeoRC
pfam HRGMv2_0975_8 HRGMv2_0975_8_20 18435 19667 - Fic
CAZyme HRGMv2_0975_8 HRGMv2_0975_8_21 20036 21457 - GH1
TC HRGMv2_0975_8 HRGMv2_0975_8_22 21534 23312 - 4.A.3.1.1
TF HRGMv2_0975_8 HRGMv2_0975_8_23 23588 24598 + LacI
TC HRGMv2_0975_8 HRGMv2_0975_8_24 25012 26772 - 4.A.3.1.1
CAZyme HRGMv2_0975_8 HRGMv2_0975_8_25 26949 28391 - GH1
TF HRGMv2_0975_8 HRGMv2_0975_8_26 28733 29770 + LacI
CAZyme HRGMv2_0975_8 HRGMv2_0975_8_27 30035 31474 - GH1
TC HRGMv2_0975_8 HRGMv2_0975_8_28 31541 33307 - 4.A.3.1.1
TF HRGMv2_0975_8 HRGMv2_0975_8_29 33665 34669 + LacI
TC HRGMv2_0975_8 HRGMv2_0975_8_30 34883 35221 + 4.A.3.1.2
Gene ID: HRGMv2_0975_8_18
Type: TC
Location: 16201 - 17895 (+)
Gene ID: HRGMv2_0975_8_19
Type: STP
Location: 18058 - 18438 (+)
Gene ID: HRGMv2_0975_8_20
Type: pfam
Location: 18435 - 19667 (-)
Gene ID: HRGMv2_0975_8_21
Type: CAZyme
Location: 20036 - 21457 (-)
Gene ID: HRGMv2_0975_8_22
Type: TC
Location: 21534 - 23312 (-)
Gene ID: HRGMv2_0975_8_23
Type: TF
Location: 23588 - 24598 (+)
Gene ID: HRGMv2_0975_8_24
Type: TC
Location: 25012 - 26772 (-)
Gene ID: HRGMv2_0975_8_25
Type: CAZyme
Location: 26949 - 28391 (-)
Gene ID: HRGMv2_0975_8_26
Type: TF
Location: 28733 - 29770 (+)
Gene ID: HRGMv2_0975_8_27
Type: CAZyme
Location: 30035 - 31474 (-)
Gene ID: HRGMv2_0975_8_28
Type: TC
Location: 31541 - 33307 (-)
Gene ID: HRGMv2_0975_8_29
Type: TF
Location: 33665 - 34669 (+)
Gene ID: HRGMv2_0975_8_30
Type: TC
Location: 34883 - 35221 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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