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Cluster: HRGMv2_0975_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0975_8 HRGMv2_0975_8_1 628 1071 + 4.A.6.1.16
pfam HRGMv2_0975_8 HRGMv2_0975_8_2 1071 1352 + YajC
TC HRGMv2_0975_8 HRGMv2_0975_8_3 1389 1871 + 4.A.6.1.4
TC HRGMv2_0975_8 HRGMv2_0975_8_4 1962 2762 + 4.A.6.1.4
TC HRGMv2_0975_8 HRGMv2_0975_8_5 2752 3834 + 4.A.6.1.4
TF HRGMv2_0975_8 HRGMv2_0975_8_6 4019 4750 + GntR
STP HRGMv2_0975_8 HRGMv2_0975_8_7 4865 6031 + SIS | SIS
CAZyme HRGMv2_0975_8 HRGMv2_0975_8_8 6150 7319 + CE9
Gene ID: HRGMv2_0975_8_1
Type: TC
Location: 628 - 1071 (+)
Gene ID: HRGMv2_0975_8_2
Type: pfam
Location: 1071 - 1352 (+)
Gene ID: HRGMv2_0975_8_3
Type: TC
Location: 1389 - 1871 (+)
Gene ID: HRGMv2_0975_8_4
Type: TC
Location: 1962 - 2762 (+)
Gene ID: HRGMv2_0975_8_5
Type: TC
Location: 2752 - 3834 (+)
Gene ID: HRGMv2_0975_8_6
Type: TF
Location: 4019 - 4750 (+)
Gene ID: HRGMv2_0975_8_7
Type: STP
Location: 4865 - 6031 (+)
Gene ID: HRGMv2_0975_8_8
Type: CAZyme
Location: 6150 - 7319 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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