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Cluster: HRGMv2_0975_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0975_35 HRGMv2_0975_35_10 8867 10372 + GH77
CAZyme HRGMv2_0975_35 HRGMv2_0975_35_11 10501 12768 + GT35
TC HRGMv2_0975_35 HRGMv2_0975_35_12 13224 14423 - 3.A.1.1.22
TC HRGMv2_0975_35 HRGMv2_0975_35_13 14492 15331 - 3.A.1.1.45
TC HRGMv2_0975_35 HRGMv2_0975_35_14 15331 16185 - 3.A.1.1.45
TC HRGMv2_0975_35 HRGMv2_0975_35_15 16273 17589 - 3.A.1.1.45
TF HRGMv2_0975_35 HRGMv2_0975_35_16 17896 18615 - GntR
TC HRGMv2_0975_35 HRGMv2_0975_35_17 18878 21295 + 4.A.1.1.8
Gene ID: HRGMv2_0975_35_10
Type: CAZyme
Location: 8867 - 10372 (+)
Gene ID: HRGMv2_0975_35_11
Type: CAZyme
Location: 10501 - 12768 (+)
Gene ID: HRGMv2_0975_35_12
Type: TC
Location: 13224 - 14423 (-)
Gene ID: HRGMv2_0975_35_13
Type: TC
Location: 14492 - 15331 (-)
Gene ID: HRGMv2_0975_35_14
Type: TC
Location: 15331 - 16185 (-)
Gene ID: HRGMv2_0975_35_15
Type: TC
Location: 16273 - 17589 (-)
Gene ID: HRGMv2_0975_35_16
Type: TF
Location: 17896 - 18615 (-)
Gene ID: HRGMv2_0975_35_17
Type: TC
Location: 18878 - 21295 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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